Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_08560 | Not Available | Negative | 2102330 - 2102689 | 13635.0 |
| phenylalanine--trna ligase subunit beta | DUE52_08565 | Not Available | Negative | 2102770 - 2105202 | 89607.5 |
| duf1684 domain-containing protein | DUE52_08570 | Not Available | Negative | 2105337 - 2105966 | 24027.5 |
| wxcm-like domain-containing protein | DUE52_08575 | Not Available | Positive | 2106067 - 2106426 | 13742.3 |
| riboflavin synthase | DUE52_08580 | Not Available | Positive | 2106493 - 2107098 | 22114.2 |
| pasta domain-containing protein | DUE52_08585 | Not Available | Positive | 2107154 - 2107942 | 28736.7 |
| t9ss c-terminal target domain-containing protein | DUE52_08590 | Not Available | Positive | 2107939 - 2109849 | 70067.1 |
| rhodanese-like domain-containing protein | DUE52_08595 | Not Available | Positive | 2109892 - 2110200 | 11765.8 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DUE52_08600 | Not Available | Negative | 2110276 - 2111208 | 35050.9 |
| duf4230 domain-containing protein | DUE52_08605 | Not Available | Positive | 2111311 - 2111994 | 26490.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
