Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_08505 | Not Available | Negative | 2089900 - 2090742 | 31488.1 |
| pkd domain-containing protein | DUE52_08510 | Not Available | Negative | 2090757 - 2091089 | 12106.6 |
| pas domain s-box protein | DUE52_08515 | Not Available | Positive | 2091315 - 2095037 | 139977.0 |
| rida family protein | DUE52_08520 | Not Available | Positive | 2095049 - 2095444 | 14465.5 |
| transcriptional regulator | DUE52_08525 | Not Available | Positive | 2095578 - 2095913 | 12660.8 |
| port family protein | DUE52_08530 | Not Available | Negative | 2095967 - 2096752 | 28121.1 |
| peptidoglycan-binding protein lysm | DUE52_08535 | Not Available | Positive | 2096986 - 2097459 | 16882.4 |
| voc family protein | DUE52_08540 | Not Available | Negative | 2097537 - 2097902 | 13088.4 |
| ribonuclease y | DUE52_08550 | Not Available | Negative | 2100259 - 2101830 | 59377.9 |
| cell division protein zapa | DUE52_08555 | Not Available | Negative | 2101972 - 2102265 | 11210.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
