Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | DUE52_08355 | Not Available | Positive | 2053418 - 2053648 | 8444.42 |
| co-chaperone groes | DUE52_08360 | Not Available | Positive | 2053766 - 2054143 | 14248.1 |
| duf4174 domain-containing protein | DUE52_08365 | Not Available | Positive | 2054214 - 2054636 | 15832.3 |
| hypothetical protein | DUE52_08370 | Not Available | Negative | 2054663 - 2055088 | 16379.5 |
| hypothetical protein | DUE52_08375 | Not Available | Positive | 2055261 - 2055614 | 13087.2 |
| hypothetical protein | DUE52_08380 | Not Available | Negative | 2055744 - 2055992 | 9544.12 |
| diheme cytochrome c-553 | DUE52_08385 | Not Available | Negative | 2056303 - 2056899 | 21152.7 |
| hypothetical protein | DUE52_08390 | Not Available | Negative | 2056961 - 2057716 | 27329.1 |
| hypothetical protein | DUE52_08395 | Not Available | Positive | 2058103 - 2058348 | 9542.55 |
| pyrophosphatase | DUE52_08400 | Not Available | Negative | 2058409 - 2058735 | 12363.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
