Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DUE52_08305 | Not Available | Positive | 2043514 - 2044191 | 25478.1 |
| sensor histidine kinase | DUE52_08310 | Not Available | Positive | 2044508 - 2045884 | 51569.0 |
| nad-dependent epimerase/dehydratase family protein | DUE52_08315 | Not Available | Negative | 2045924 - 2046595 | 24869.6 |
| tetr/acrr family transcriptional regulator | DUE52_08320 | Not Available | Negative | 2046592 - 2047176 | 22380.9 |
| hypothetical protein | DUE52_08325 | Not Available | Negative | 2047471 - 2047704 | 8940.23 |
| hypothetical protein | DUE52_08330 | Not Available | Positive | 2048250 - 2048606 | 13441.0 |
| hypothetical protein | DUE52_08335 | Not Available | Negative | 2048665 - 2050086 | 55337.0 |
| mfs transporter | DUE52_08340 | Not Available | Positive | 2050249 - 2051601 | 50381.2 |
| transposase | DUE52_08345 | Not Available | Negative | 2051696 - 2052328 | 22755.7 |
| prolipoprotein diacylglyceryl transferase | DUE52_08350 | Not Available | Negative | 2052460 - 2053293 | 31560.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
