Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit beta | DUE52_08155 | Not Available | Negative | 2003554 - 2004690 | 41456.8 |
| gliding motility-associated abc transporter substrate-binding protein gldg | DUE52_08160 | Not Available | Negative | 2004886 - 2006541 | 62269.2 |
| duf4833 domain-containing protein | DUE52_08165 | Not Available | Positive | 2006697 - 2007242 | 20826.4 |
| pig-l family deacetylase | DUE52_08170 | Not Available | Negative | 2007294 - 2008199 | 34066.3 |
| exopolygalacturonase | DUE52_08175 | Not Available | Positive | 2008331 - 2009659 | 49390.2 |
| duf1080 domain-containing protein | DUE52_08180 | Not Available | Positive | 2009766 - 2010584 | 30206.3 |
| methyltransferase | DUE52_08185 | Not Available | Positive | 2010653 - 2011705 | 38322.7 |
| s58 family peptidase | DUE52_08190 | Not Available | Negative | 2011710 - 2012834 | 39413.7 |
| ai-2e family transporter | DUE52_08195 | Not Available | Negative | 2012893 - 2014011 | 40885.4 |
| hypothetical protein | DUE52_08200 | Not Available | Positive | 2014550 - 2014774 | 8684.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
