Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DUE52_08055 | Not Available | Positive | 1977709 - 1978941 | 45042.1 |
| sugar phosphate isomerase/epimerase | DUE52_08060 | Not Available | Negative | 1979244 - 1980176 | 34371.1 |
| peptidase m14 | DUE52_08065 | Not Available | Positive | 1980350 - 1982026 | 60460.8 |
| peptidase m14 | DUE52_08070 | Not Available | Positive | 1982129 - 1983880 | 65808.9 |
| nad-dependent epimerase/dehydratase family protein | DUE52_08075 | Not Available | Positive | 1983988 - 1984902 | 32401.8 |
| arac family transcriptional regulator | DUE52_08080 | Not Available | Positive | 1984906 - 1985823 | 35714.0 |
| class i sam-dependent methyltransferase | DUE52_08085 | Not Available | Positive | 1986051 - 1986863 | 29714.4 |
| phosphoribosyltransferase | DUE52_08090 | Not Available | Negative | 1986875 - 1987384 | 18998.2 |
| ycxb family protein | DUE52_08095 | Not Available | Positive | 1987576 - 1988145 | 22136.5 |
| dabb family protein | DUE52_08100 | Not Available | Negative | 1988251 - 1988637 | 14103.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
