Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class d beta-lactamase | DUE52_08005 | Not Available | Negative | 1968376 - 1969167 | 30148.6 |
| hypothetical protein | DUE52_08010 | Not Available | Negative | 1969182 - 1970660 | 54643.6 |
| class i sam-dependent methyltransferase | DUE52_08015 | Not Available | Positive | 1970801 - 1971634 | 31778.4 |
| carbamoyl-phosphate synthase large subunit | DUE52_08020 | Not Available | Positive | 1971943 - 1974837 | 107000.0 |
| hypothetical protein | DUE52_08025 | Not Available | Positive | 1974941 - 1975156 | 8208.81 |
| putative toxin-antitoxin system toxin component, pin family | DUE52_08030 | Not Available | Positive | 1975233 - 1975667 | 16734.0 |
| duf4834 domain-containing protein | DUE52_08035 | Not Available | Positive | 1975734 - 1975970 | 9104.1 |
| hypothetical protein | DUE52_08040 | Not Available | Negative | 1975974 - 1976345 | 14269.3 |
| phosphoribosylglycinamide formyltransferase | DUE52_08045 | Not Available | Negative | 1976408 - 1977001 | 22236.0 |
| atp-binding cassette domain-containing protein | DUE52_08050 | Not Available | Positive | 1977076 - 1977702 | 22959.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
