Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DUE52_00750 | Not Available | Negative | 204321 - 205073 | 28703.7 |
| glycosyltransferase | DUE52_00755 | Not Available | Negative | 205024 - 205989 | 36944.1 |
| degt/dnrj/eryc1/strs family aminotransferase | DUE52_00760 | Not Available | Negative | 205989 - 207080 | 40698.7 |
| wxcm-like domain-containing protein | DUE52_00765 | Not Available | Negative | 207077 - 207445 | 13931.5 |
| hypothetical protein | DUE52_00770 | Not Available | Negative | 207817 - 208074 | 9544.2 |
| ferritin-like domain-containing protein | DUE52_00775 | Not Available | Negative | 208428 - 209258 | 30247.3 |
| ferritin-like domain-containing protein | DUE52_00780 | Not Available | Negative | 209274 - 210038 | 27287.6 |
| hypothetical protein | DUE52_00785 | Not Available | Positive | 210118 - 210309 | 7218.68 |
| lysr family transcriptional regulator | DUE52_00790 | Not Available | Negative | 210312 - 210647 | 12664.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 211723 - 211834 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
