Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s) ferredoxin domain-containing protein | DUE52_07905 | Not Available | Positive | 1946327 - 1946632 | 11187.6 |
| noncanonical pyrimidine nucleotidase, yjjg family | DUE52_07910 | Not Available | Positive | 1946712 - 1947404 | 26440.4 |
| duf3291 domain-containing protein | DUE52_07915 | Not Available | Negative | 1947399 - 1948139 | 27958.7 |
| hypothetical protein | DUE52_07920 | Not Available | Negative | 1948316 - 1948831 | 18771.8 |
| thioredoxin family protein | DUE52_07925 | Not Available | Negative | 1948968 - 1949597 | 22978.5 |
| 50s ribosomal protein l21 | DUE52_07930 | Not Available | Positive | 1949877 - 1950188 | 11604.2 |
| 50s ribosomal protein l27 | DUE52_07935 | Not Available | Positive | 1950278 - 1950589 | 10684.9 |
| nifu family protein | DUE52_07940 | Not Available | Positive | 1950744 - 1951346 | 21973.9 |
| hypothetical protein | DUE52_07945 | Not Available | Positive | 1951450 - 1952889 | 52264.0 |
| hypothetical protein | DUE52_07950 | Not Available | Positive | 1953361 - 1954053 | 25378.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
