Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recx family transcriptional regulator | DUE52_07805 | Not Available | Negative | 1926916 - 1927377 | 18236.8 |
| ycei family protein | DUE52_07810 | Not Available | Negative | 1927425 - 1928135 | 26011.3 |
| diheme cytochrome c-553 | DUE52_07815 | Not Available | Negative | 1928101 - 1928694 | 21252.7 |
| arac family transcriptional regulator | DUE52_07820 | Not Available | Negative | 1928819 - 1929664 | 32952.2 |
| rraa family protein | DUE52_07825 | Not Available | Negative | 1929856 - 1930788 | 34529.7 |
| rraa family protein | DUE52_07830 | Not Available | Negative | 1930915 - 1931847 | 34186.2 |
| mandelate racemase/muconate lactonizing enzyme family protein | DUE52_07835 | Not Available | Positive | 1932125 - 1933597 | 54509.6 |
| duf1684 domain-containing protein | DUE52_07840 | Not Available | Negative | 1933664 - 1934290 | 23976.7 |
| hypothetical protein | DUE52_07845 | Not Available | Negative | 1934274 - 1934726 | 16727.7 |
| duf4142 domain-containing protein | DUE52_07850 | Not Available | Positive | 1935287 - 1935838 | 20194.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
