Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo-alpha-sialidase | DUE52_07605 | Not Available | Negative | 1873696 - 1874892 | 43421.6 |
| tonb-dependent receptor | DUE52_07610 | Not Available | Negative | 1874917 - 1877280 | 88104.7 |
| hypothetical protein | DUE52_07615 | Not Available | Negative | 1877391 - 1877765 | 14054.9 |
| hypothetical protein | DUE52_07620 | Not Available | Positive | 1878066 - 1879094 | 39034.1 |
| hypothetical protein | DUE52_07625 | Not Available | Negative | 1879199 - 1879621 | 16210.4 |
| hypothetical protein | DUE52_07630 | Not Available | Negative | 1879922 - 1880404 | 17880.4 |
| winged helix-turn-helix domain-containing protein | DUE52_07635 | Not Available | Negative | 1880358 - 1880831 | 17671.5 |
| hypothetical protein | DUE52_07640 | Not Available | Negative | 1881353 - 1881784 | 16807.5 |
| insulinase family protein | DUE52_07645 | Not Available | Negative | 1881980 - 1884067 | 75845.7 |
| insulinase family protein | DUE52_07650 | Not Available | Negative | 1884114 - 1885547 | 53615.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
