Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_07505 | Not Available | Negative | 1849716 - 1850279 | 20394.7 |
| merc domain-containing protein | DUE52_07510 | Not Available | Positive | 1850450 - 1850830 | 13904.2 |
| gfo/idh/moca family oxidoreductase | DUE52_07515 | Not Available | Positive | 1851344 - 1852360 | 36508.7 |
| tonb-dependent receptor | DUE52_07520 | Not Available | Positive | 1852428 - 1855583 | 114629.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_07525 | Not Available | Positive | 1855597 - 1857120 | 56566.2 |
| alpha/beta fold hydrolase | DUE52_07530 | Not Available | Positive | 1857157 - 1859469 | 87021.0 |
| gfo/idh/moca family oxidoreductase | DUE52_07535 | Not Available | Positive | 1859512 - 1860891 | 50832.2 |
| glucose/galactose mfs transporter | DUE52_07540 | Not Available | Positive | 1860903 - 1862282 | 50504.0 |
| n-acetylglucosamine-6-phosphate deacetylase | DUE52_07545 | Not Available | Positive | 1862248 - 1863468 | 44125.9 |
| glucosamine-6-phosphate deaminase | DUE52_07550 | Not Available | Positive | 1863499 - 1864266 | 28581.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
