Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ypda family putative bacillithiol disulfide reductase | DUE52_00700 | Not Available | Positive | 189674 - 190702 | 38351.1 |
| hypothetical protein | DUE52_00705 | Not Available | Negative | 190726 - 192771 | 77607.3 |
| hypothetical protein | DUE52_00710 | Not Available | Negative | 192998 - 194962 | 74050.9 |
| llaji family restriction endonuclease | DUE52_00715 | Not Available | Negative | 195050 - 196735 | 66048.8 |
| hypothetical protein | DUE52_00720 | Not Available | Negative | 196732 - 197877 | 44015.8 |
| hypothetical protein | DUE52_00725 | Not Available | Negative | 197885 - 198412 | 20023.8 |
| site-specific dna-methyltransferase | DUE52_00730 | Not Available | Negative | 198519 - 199679 | 43085.3 |
| xre family transcriptional regulator | DUE52_00735 | Not Available | Negative | 199709 - 200053 | 13414.1 |
| alpha-l-rhamnosidase | DUE52_00740 | Not Available | Positive | 200175 - 202571 | 90011.2 |
| hypothetical protein | DUE52_00745 | Not Available | Negative | 202690 - 204321 | 62663.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
