Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_07305 | Not Available | Negative | 1807283 - 1808452 | 44571.7 |
| blai/meci/copy family transcriptional regulator | DUE52_07310 | Not Available | Negative | 1808454 - 1808819 | 14362.1 |
| hypothetical protein | DUE52_07315 | Not Available | Negative | 1809038 - 1810966 | 67116.0 |
| oxidoreductase | DUE52_07320 | Not Available | Positive | 1811190 - 1812257 | 40336.6 |
| excinuclease abc subunit uvra | DUE52_07325 | Not Available | Positive | 1812500 - 1815391 | 107482.0 |
| hepn domain-containing protein | DUE52_07330 | Not Available | Positive | 1815411 - 1815566 | 5705.23 |
| hypothetical protein | DUE52_07335 | Not Available | Positive | 1815803 - 1816204 | 15204.2 |
| sterol desaturase family protein | DUE52_07340 | Not Available | Negative | 1816214 - 1817227 | 39242.7 |
| glutamate-5-semialdehyde dehydrogenase | DUE52_07345 | Not Available | Negative | 1817351 - 1818601 | 45461.7 |
| glutamate 5-kinase | DUE52_07350 | Not Available | Negative | 1818616 - 1819644 | 36522.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
