Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane metalloprotease | DUE52_07255 | Not Available | Negative | 1797063 - 1798241 | 44183.9 |
| hypothetical protein | DUE52_07260 | Not Available | Positive | 1798471 - 1799547 | 40524.8 |
| mboat family protein | DUE52_07265 | Not Available | Positive | 1799560 - 1801056 | 56235.8 |
| transcriptional regulator | DUE52_07270 | Not Available | Negative | 1801246 - 1801608 | 13779.8 |
| phage portal protein | DUE52_07275 | Not Available | Negative | 1801696 - 1802052 | 13565.0 |
| amidohydrolase | DUE52_07280 | Not Available | Positive | 1802238 - 1803377 | 41849.7 |
| cytochrome c | DUE52_07285 | Not Available | Positive | 1803572 - 1804450 | 32143.7 |
| glucosamine-6-phosphate deaminase | DUE52_07290 | Not Available | Positive | 1804535 - 1805254 | 25954.8 |
| hypothetical protein | DUE52_07295 | Not Available | Positive | 1805267 - 1805713 | 16960.8 |
| tlpa family protein disulfide reductase | DUE52_07300 | Not Available | Negative | 1806049 - 1807230 | 44928.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
