Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2236 domain-containing protein | DUE52_07100 | Not Available | Positive | 1753811 - 1754812 | 37552.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DUE52_07105 | Not Available | Positive | 1754894 - 1756270 | 50279.3 |
| type i restriction endonuclease subunit r | DUE52_07110 | Not Available | Positive | 1756372 - 1759374 | 115886.0 |
| restriction endonuclease subunit s | DUE52_07120 | Not Available | Positive | 1759715 - 1760890 | 45146.9 |
| anticodon nuclease | DUE52_07125 | Not Available | Positive | 1760894 - 1762015 | 43925.1 |
| type i restriction-modification system subunit m | DUE52_07130 | Not Available | Positive | 1762274 - 1763902 | 61915.5 |
| hypothetical protein | DUE52_07135 | Not Available | Positive | 1765316 - 1768801 | 119494.0 |
| hypothetical protein | DUE52_07140 | Not Available | Positive | 1768893 - 1769963 | 38635.8 |
| polysaccharide biosynthesis protein | DUE52_07145 | Not Available | Positive | 1770088 - 1772010 | 72262.5 |
| dna-binding response regulator | DUE52_07150 | Not Available | Positive | 1772066 - 1772695 | 23816.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
