Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | DUE52_07050 | Not Available | Positive | 1743664 - 1744842 | 44663.2 |
| 4-hydroxyphenylpyruvate dioxygenase | DUE52_07055 | Not Available | Positive | 1744857 - 1745993 | 42299.9 |
| phenylalanine 4-monooxygenase | DUE52_07060 | Not Available | Positive | 1746099 - 1746821 | 27967.2 |
| marr family transcriptional regulator | DUE52_07065 | Not Available | Positive | 1746921 - 1747358 | 17025.3 |
| fumarylacetoacetase | DUE52_07070 | Not Available | Positive | 1747467 - 1748654 | 43679.0 |
| duf1801 domain-containing protein | DUE52_07075 | Not Available | Positive | 1748852 - 1749214 | 13395.2 |
| hypothetical protein | DUE52_07080 | Not Available | Negative | 1749329 - 1749943 | 23312.1 |
| gamma-glutamyltransferase | DUE52_07085 | Not Available | Negative | 1750015 - 1751814 | 65495.6 |
| abc transporter permease | DUE52_07090 | Not Available | Positive | 1751946 - 1753187 | 45555.9 |
| hypothetical protein | DUE52_07095 | Not Available | Positive | 1753257 - 1753739 | 17906.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
