Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | DUE52_07000 | Not Available | Negative | 1729092 - 1729835 | 27657.9 |
| sugar phosphate isomerase/epimerase | DUE52_07005 | Not Available | Negative | 1729941 - 1730864 | 33645.6 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_07010 | Not Available | Negative | 1731036 - 1732757 | 64141.5 |
| tonb-dependent receptor | DUE52_07015 | Not Available | Negative | 1732791 - 1735745 | 109374.0 |
| iron dicitrate transport regulator fecr | DUE52_07020 | Not Available | Negative | 1735968 - 1736810 | 31776.8 |
| cap domain-containing protein | DUE52_07025 | Not Available | Negative | 1737048 - 1737905 | 31361.4 |
| hypothetical protein | DUE52_07030 | Not Available | Negative | 1738014 - 1739465 | 51753.0 |
| amp-dependent synthetase | DUE52_07035 | Not Available | Positive | 1739721 - 1741400 | 62939.2 |
| hypothetical protein | DUE52_07040 | Not Available | Negative | 1741577 - 1741984 | 14505.5 |
| nucleotidyltransferase | DUE52_07045 | Not Available | Negative | 1742439 - 1743350 | 34171.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
