Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fha domain-containing protein | DUE52_00645 | Not Available | Positive | 180005 - 180697 | 25839.3 |
| hypothetical protein | DUE52_00650 | Not Available | Positive | 180810 - 181916 | 39555.7 |
| fha domain-containing protein | DUE52_00655 | Not Available | Positive | 182191 - 182640 | 16829.1 |
| caspase family protein | DUE52_00665 | Not Available | Positive | 184189 - 184950 | 28208.7 |
| sigma-70 family rna polymerase sigma factor | DUE52_00670 | Not Available | Positive | 184989 - 185579 | 22912.3 |
| hypothetical protein | DUE52_00675 | Not Available | Positive | 185584 - 185991 | 15458.3 |
| hypothetical protein | DUE52_00680 | Not Available | Negative | 186001 - 186183 | 6759.32 |
| doxx family protein | DUE52_00685 | Not Available | Positive | 186182 - 186556 | 13267.1 |
| potassium transporter | DUE52_00690 | Not Available | Negative | 186929 - 188815 | 68626.1 |
| nad(p)h oxidoreductase | DUE52_00695 | Not Available | Negative | 188822 - 189412 | 22921.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
