Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo-alpha-sialidase | DUE52_06850 | Not Available | Negative | 1696267 - 1697379 | 40949.6 |
| exo-alpha-sialidase | DUE52_06855 | Not Available | Negative | 1697423 - 1698526 | 40448.2 |
| exo-alpha-sialidase | DUE52_06860 | Not Available | Negative | 1699344 - 1700474 | 42292.3 |
| exo-alpha-sialidase | DUE52_06865 | Not Available | Negative | 1700505 - 1702178 | 61902.3 |
| dihydrodipicolinate synthase family protein | DUE52_06870 | Not Available | Negative | 1702251 - 1703162 | 33582.6 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_06875 | Not Available | Negative | 1703220 - 1704692 | 55452.0 |
| tonb-dependent receptor | DUE52_06880 | Not Available | Negative | 1704706 - 1707894 | 116867.0 |
| fadr family transcriptional regulator | DUE52_06885 | Not Available | Positive | 1708093 - 1708788 | 26750.5 |
| dde transposase | DUE52_06890 | Not Available | Positive | 1708949 - 1709141 | 7446.74 |
| crp/fnr family transcriptional regulator | DUE52_06895 | Not Available | Negative | 1709310 - 1709885 | 23073.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
