Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DUE52_06695 | Not Available | Positive | 1661934 - 1663466 | 56805.9 |
| alkaline phosphatase | DUE52_06700 | Not Available | Negative | 1663545 - 1665404 | 68257.4 |
| alkaline phosphatase | DUE52_06705 | Not Available | Negative | 1665401 - 1666393 | 34449.8 |
| esterase-like activity of phytase family protein | DUE52_06710 | Not Available | Negative | 1666516 - 1667823 | 45456.2 |
| hypothetical protein | DUE52_06715 | Not Available | Negative | 1667896 - 1668147 | 9562.4 |
| alkaline phosphatase | DUE52_06720 | Not Available | Positive | 1668455 - 1669966 | 53064.2 |
| hypothetical protein | DUE52_06725 | Not Available | Negative | 1670053 - 1670370 | 12304.0 |
| na/pi cotransporter family protein | DUE52_06730 | Not Available | Negative | 1670399 - 1671370 | 34087.9 |
| hypothetical protein | DUE52_06740 | Not Available | Positive | 1671904 - 1674045 | 80781.3 |
| dinb family protein | DUE52_06745 | Not Available | Positive | 1674132 - 1674629 | 18835.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
