Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_06645 | Not Available | Negative | 1645899 - 1646132 | 8711.96 |
| hypothetical protein | DUE52_06650 | Not Available | Positive | 1646347 - 1646556 | 8024.73 |
| response regulator | DUE52_06655 | Not Available | Positive | 1646575 - 1647315 | 28335.7 |
| pas domain s-box protein | DUE52_06660 | Not Available | Positive | 1647346 - 1650780 | 129713.0 |
| hsp70 family protein | DUE52_06665 | Not Available | Positive | 1651120 - 1652406 | 47098.3 |
| hypothetical protein | DUE52_06670 | Not Available | Positive | 1652562 - 1655204 | 91904.0 |
| transcriptional regulator | DUE52_06675 | Not Available | Negative | 1655248 - 1655631 | 14291.6 |
| nad-dependent dehydratase | DUE52_06680 | Not Available | Positive | 1655733 - 1656626 | 31995.1 |
| duf4976 domain-containing protein | DUE52_06685 | Not Available | Positive | 1656742 - 1658166 | 51885.5 |
| tonb-dependent receptor | DUE52_06690 | Not Available | Positive | 1658582 - 1661914 | 120956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
