Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent alcohol dehydrogenase | DUE52_06590 | Not Available | Positive | 1636256 - 1637272 | 36257.1 |
| sialate o-acetylesterase | DUE52_06595 | Not Available | Positive | 1637428 - 1638222 | 28917.9 |
| poly(3-hydroxybutyrate) depolymerase | DUE52_06600 | Not Available | Positive | 1638219 - 1639109 | 33097.5 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | DUE52_06605 | Not Available | Negative | 1639214 - 1639444 | 8662.81 |
| iclr family transcriptional regulator | DUE52_06610 | Not Available | Negative | 1639476 - 1640213 | 27305.3 |
| bile acid:sodium symporter | DUE52_06615 | Not Available | Positive | 1640357 - 1641298 | 33780.1 |
| gnat family n-acetyltransferase | DUE52_06625 | Not Available | Positive | 1642085 - 1642756 | 26290.3 |
| hypothetical protein | DUE52_06630 | Not Available | Negative | 1642879 - 1643304 | 17293.3 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_06635 | Not Available | Positive | 1643576 - 1644613 | 37272.7 |
| esterase | DUE52_06640 | Not Available | Positive | 1644699 - 1645769 | 39118.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
