Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgnh/gdsl hydrolase family protein | DUE52_06540 | Not Available | Positive | 1622471 - 1623169 | 26690.3 |
| hypothetical protein | DUE52_06545 | Not Available | Positive | 1623166 - 1625979 | 105530.0 |
| hypothetical protein | DUE52_06550 | Not Available | Positive | 1626024 - 1627175 | 43930.4 |
| hypothetical protein | DUE52_06555 | Not Available | Positive | 1627197 - 1628699 | 56410.6 |
| glycoside hydrolase family 28 protein | DUE52_06560 | Not Available | Positive | 1629013 - 1630500 | 54751.4 |
| sodium transporter | DUE52_06565 | Not Available | Positive | 1630503 - 1632209 | 62788.8 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_06570 | Not Available | Positive | 1632326 - 1633027 | 25359.3 |
| rraa family protein | DUE52_06575 | Not Available | Positive | 1633024 - 1633731 | 26222.6 |
| hypothetical protein | DUE52_06580 | Not Available | Positive | 1633731 - 1635812 | 77309.2 |
| voc family protein | DUE52_06585 | Not Available | Positive | 1635805 - 1636212 | 15069.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
