Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease v | DUE52_06490 | Not Available | Negative | 1605187 - 1605891 | 25921.4 |
| hypothetical protein | DUE52_06495 | Not Available | Positive | 1606026 - 1606739 | 25821.2 |
| hypothetical protein | DUE52_06500 | Not Available | Negative | 1606854 - 1609787 | 112020.0 |
| arac family transcriptional regulator | DUE52_06505 | Not Available | Negative | 1610373 - 1611509 | 43224.1 |
| hypothetical protein | DUE52_06510 | Not Available | Negative | 1611627 - 1612034 | 15783.9 |
| duf2339 domain-containing protein | DUE52_06515 | Not Available | Positive | 1612376 - 1614874 | 92015.5 |
| hypothetical protein | DUE52_06520 | Not Available | Positive | 1614858 - 1616087 | 46541.8 |
| tonb-dependent receptor | DUE52_06525 | Not Available | Positive | 1616411 - 1619527 | 113021.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_06530 | Not Available | Positive | 1619542 - 1620954 | 52172.6 |
| hypothetical protein | DUE52_06535 | Not Available | Positive | 1620961 - 1622463 | 55573.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
