Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | DUE52_06390 | Not Available | Negative | 1584912 - 1586276 | 50545.9 |
| hypothetical protein | DUE52_06395 | Not Available | Negative | 1586277 - 1586600 | 12493.0 |
| hypothetical protein | DUE52_06400 | Not Available | Negative | 1586597 - 1587118 | 19156.2 |
| rrf2 family transcriptional regulator | DUE52_06405 | Not Available | Positive | 1587246 - 1587656 | 14923.0 |
| nad(p)-dependent oxidoreductase | DUE52_06410 | Not Available | Positive | 1587859 - 1588503 | 23009.4 |
| sensor histidine kinase | DUE52_06415 | Not Available | Negative | 1588532 - 1589866 | 49785.0 |
| auracyanin family protein | DUE52_06420 | Not Available | Negative | 1589955 - 1591958 | 73609.3 |
| pp_01278 | DUE52_06425 | Not Available | Negative | 1591970 - 1592308 | Not Available |
| hypothetical protein | DUE52_06430 | Not Available | Negative | 1592315 - 1594072 | 63341.4 |
| nucleotidyltransferase domain-containing protein | DUE52_06435 | Not Available | Positive | 1594371 - 1594685 | 11653.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
