Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_06340 | Not Available | Negative | 1570946 - 1574095 | 117121.0 |
| helix-turn-helix domain-containing protein | DUE52_06345 | Not Available | Positive | 1574305 - 1578366 | 153337.0 |
| 6-phosphofructokinase | DUE52_06350 | Not Available | Negative | 1578367 - 1579359 | 34600.6 |
| hypothetical protein | DUE52_06355 | Not Available | Negative | 1579429 - 1580406 | 37031.4 |
| hypothetical protein | DUE52_06360 | Not Available | Positive | 1580357 - 1581172 | 30846.9 |
| transcription elongation factor greab | DUE52_06365 | Not Available | Positive | 1581231 - 1581641 | 15058.4 |
| xre family transcriptional regulator | DUE52_06370 | Not Available | Positive | 1581676 - 1581957 | 10297.7 |
| hpp family protein | DUE52_06375 | Not Available | Positive | 1582060 - 1582695 | 23119.9 |
| hypothetical protein | DUE52_06380 | Not Available | Positive | 1582937 - 1584016 | 39670.5 |
| hypothetical protein | DUE52_06385 | Not Available | Negative | 1584179 - 1584652 | 17374.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
