Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DUE52_06285 | Not Available | Negative | 1555032 - 1555820 | 27482.0 |
| phosphoenolpyruvate hydrolase family protein | DUE52_06295 | Not Available | Negative | 1556849 - 1557706 | 30849.1 |
| upf0261 family protein | DUE52_06300 | Not Available | Negative | 1557722 - 1558939 | 42997.0 |
| sugar phosphate isomerase/epimerase | DUE52_06305 | Not Available | Negative | 1558946 - 1559791 | 30742.6 |
| gfo/idh/moca family oxidoreductase | DUE52_06310 | Not Available | Negative | 1560249 - 1561361 | 41326.1 |
| thua domain-containing protein | DUE52_06315 | Not Available | Negative | 1561467 - 1562201 | 26709.0 |
| dehydrogenase | DUE52_06320 | Not Available | Negative | 1562256 - 1565846 | 131339.0 |
| hypothetical protein | DUE52_06325 | Not Available | Negative | 1565865 - 1567952 | 78150.2 |
| duf3823 domain-containing protein | DUE52_06330 | Not Available | Negative | 1568265 - 1568999 | 26898.6 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_06335 | Not Available | Negative | 1569065 - 1570933 | 69042.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
