Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_06185 | Not Available | Negative | 1526335 - 1527342 | 37950.0 |
| four-helix bundle copper-binding protein | DUE52_06190 | Not Available | Negative | 1527796 - 1528155 | 13146.7 |
| duf1264 domain-containing protein | DUE52_06195 | Not Available | Negative | 1528297 - 1529058 | 28471.2 |
| cysteine hydrolase | DUE52_06200 | Not Available | Negative | 1529051 - 1529701 | 24134.1 |
| duf892 family protein | DUE52_06205 | Not Available | Negative | 1529783 - 1530049 | 9826.63 |
| hypothetical protein | DUE52_06210 | Not Available | Positive | 1530420 - 1531139 | 27011.3 |
| wyl domain-containing protein | DUE52_06215 | Not Available | Positive | 1531613 - 1532503 | 33714.5 |
| hypothetical protein | DUE52_06220 | Not Available | Negative | 1532512 - 1532748 | 8702.4 |
| hypothetical protein | DUE52_06225 | Not Available | Positive | 1533228 - 1535318 | 81554.8 |
| type i-b crispr-associated protein cas7/csh2 | DUE52_06230 | Not Available | Positive | 1535340 - 1536344 | 37626.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
