Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_06130 | Not Available | Negative | 1511657 - 1514842 | 111906.0 |
| response regulator | DUE52_06135 | Not Available | Negative | 1515278 - 1516333 | 39290.7 |
| universal stress protein | DUE52_06140 | Not Available | Positive | 1516804 - 1517658 | 31338.6 |
| hypothetical protein | DUE52_06145 | Not Available | Positive | 1517723 - 1518424 | 26377.7 |
| hypothetical protein | DUE52_06150 | Not Available | Negative | 1518950 - 1521412 | 86610.7 |
| duf4595 domain-containing protein | DUE52_06155 | Not Available | Negative | 1521546 - 1522451 | 34149.1 |
| thioredoxin | DUE52_06160 | Not Available | Positive | 1522984 - 1523304 | 12320.0 |
| hypothetical protein | DUE52_06165 | Not Available | Negative | 1523678 - 1523764 | 3516.17 |
| glutathione-dependent formaldehyde dehydrogenase | DUE52_06170 | Not Available | Positive | 1523921 - 1525075 | 41401.2 |
| hypothetical protein | DUE52_06175 | Not Available | Positive | 1525083 - 1525586 | 19076.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
