Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_06025 | Not Available | Negative | 1481920 - 1483041 | 41081.8 |
| hypothetical protein | DUE52_06030 | Not Available | Negative | 1483283 - 1483834 | 21184.5 |
| pas domain-containing sensor histidine kinase | DUE52_06040 | Not Available | Positive | 1484944 - 1486536 | 59418.4 |
| lytic transglycosylase domain-containing protein | DUE52_06045 | Not Available | Negative | 1486559 - 1487743 | 43944.0 |
| lytic transglycosylase domain-containing protein | DUE52_06050 | Not Available | Negative | 1488209 - 1489264 | 39708.8 |
| dna helicase recq | DUE52_06055 | Not Available | Negative | 1489438 - 1491570 | 80048.6 |
| hypothetical protein | DUE52_06060 | Not Available | Negative | 1491740 - 1493023 | 47765.2 |
| s9 family peptidase | DUE52_06065 | Not Available | Positive | 1493247 - 1495160 | 71626.8 |
| cytochrome-c peroxidase | DUE52_06070 | Not Available | Negative | 1495167 - 1496366 | 44727.2 |
| hypothetical protein | DUE52_06075 | Not Available | Negative | 1496828 - 1497394 | 19765.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
