Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circadian clock protein kaib | DUE52_05975 | Not Available | Negative | 1468351 - 1468644 | 11007.7 |
| kaic 1 | DUE52_05980 | Not Available | Negative | 1468658 - 1470370 | 63703.9 |
| duf3179 domain-containing protein | DUE52_05985 | Not Available | Negative | 1470540 - 1471727 | 45144.8 |
| carboxymuconolactone decarboxylase | DUE52_05990 | Not Available | Negative | 1471754 - 1472302 | 19836.8 |
| mfs transporter | DUE52_05995 | Not Available | Negative | 1472380 - 1473633 | 44862.6 |
| tonb-dependent receptor | DUE52_06000 | Not Available | Negative | 1473635 - 1476433 | 102045.0 |
| carboxymuconolactone decarboxylase | DUE52_06005 | Not Available | Negative | 1476537 - 1477097 | 20432.6 |
| tonb-dependent receptor | DUE52_06010 | Not Available | Negative | 1477150 - 1479366 | 82474.3 |
| phosphatase pap2 family protein | DUE52_06015 | Not Available | Negative | 1479378 - 1480925 | 56337.7 |
| hypothetical protein | DUE52_06020 | Not Available | Negative | 1480984 - 1481874 | 33028.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
