Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | DUE52_00535 | Not Available | Negative | 155305 - 157152 | 67741.9 |
| hypothetical protein | DUE52_00540 | Not Available | Positive | 157248 - 159020 | 67497.6 |
| duf1569 domain-containing protein | DUE52_00545 | Not Available | Positive | 159138 - 159596 | 17694.2 |
| hypothetical protein | DUE52_00550 | Not Available | Negative | 159653 - 160282 | 24293.7 |
| hypothetical protein | DUE52_00555 | Not Available | Negative | 160279 - 160536 | 9608.88 |
| hypothetical protein | DUE52_00560 | Not Available | Negative | 160676 - 161161 | 17959.3 |
| hypothetical protein | DUE52_00570 | Not Available | Negative | 162643 - 163437 | 29830.3 |
| hypothetical protein | DUE52_00580 | Not Available | Negative | 164077 - 164298 | 8306.15 |
| polyhydroxyalkanoate depolymerase | DUE52_00585 | Not Available | Negative | 164611 - 165549 | 35737.6 |
| hypothetical protein | DUE52_00590 | Not Available | Negative | 165679 - 166815 | 44201.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
