Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_05925 | Not Available | Negative | 1456008 - 1456610 | 22184.1 |
| hypothetical protein | DUE52_05930 | Not Available | Negative | 1456710 - 1457111 | 14279.6 |
| chemotaxis protein cheb | DUE52_05935 | Not Available | Negative | 1457350 - 1458363 | 37079.5 |
| pas domain s-box protein | DUE52_05940 | Not Available | Positive | 1458527 - 1462639 | 155415.0 |
| response regulator | DUE52_05945 | Not Available | Positive | 1462801 - 1463280 | 18513.1 |
| hypothetical protein | DUE52_05950 | Not Available | Negative | 1463306 - 1464130 | 30276.0 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | DUE52_05955 | Not Available | Negative | 1464263 - 1466296 | 77769.5 |
| response regulator | DUE52_05960 | Not Available | Negative | 1466319 - 1466744 | 15676.9 |
| pas domain-containing protein | DUE52_05965 | Not Available | Negative | 1466746 - 1468026 | 48312.9 |
| circadian clock protein kaib | DUE52_05970 | Not Available | Negative | 1468026 - 1468349 | 11979.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
