Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_05875 | Not Available | Positive | 1443696 - 1444364 | 25032.8 |
| ethanolamine permease | DUE52_05880 | Not Available | Positive | 1444458 - 1445804 | 48411.7 |
| hypothetical protein | DUE52_05885 | Not Available | Positive | 1446008 - 1446985 | 37172.7 |
| hypothetical protein | DUE52_05890 | Not Available | Positive | 1447034 - 1448446 | 53890.9 |
| nipsnap family protein | DUE52_05895 | Not Available | Negative | 1448527 - 1449300 | 29384.0 |
| alpha-e domain-containing protein | DUE52_05900 | Not Available | Positive | 1449443 - 1450405 | 37412.3 |
| hypothetical protein | DUE52_05905 | Not Available | Negative | 1450472 - 1451239 | 28309.8 |
| 1,4-alpha-glucan branching protein glgb | DUE52_05910 | Not Available | Negative | 1451527 - 1453530 | 77443.2 |
| uma2 family endonuclease | DUE52_05915 | Not Available | Negative | 1453604 - 1454197 | 22916.5 |
| trehalose synthase | DUE52_05920 | Not Available | Negative | 1454221 - 1455906 | 64309.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
