Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nifu family protein | DUE52_05825 | Not Available | Negative | 1436898 - 1437164 | 9548.68 |
| iron-sulfur cluster carrier protein apbc | DUE52_05830 | Not Available | Negative | 1437243 - 1438352 | 39598.2 |
| hypothetical protein | DUE52_05835 | Not Available | Negative | 1438382 - 1439395 | 38767.3 |
| 50s ribosomal protein l9 | DUE52_05840 | Not Available | Negative | 1439476 - 1439919 | 16013.4 |
| 30s ribosomal protein s18 | DUE52_05845 | Not Available | Negative | 1440029 - 1440280 | 9694.0 |
| 30s ribosomal protein s6 | DUE52_05850 | Not Available | Negative | 1440283 - 1440666 | 14830.7 |
| hypothetical protein | DUE52_05855 | Not Available | Negative | 1440829 - 1441773 | 35585.3 |
| yggs family pyridoxal phosphate-dependent enzyme | DUE52_05860 | Not Available | Positive | 1441941 - 1442603 | 24768.8 |
| duf423 domain-containing protein | DUE52_05865 | Not Available | Positive | 1442618 - 1443004 | 13590.0 |
| hypothetical protein | DUE52_05870 | Not Available | Positive | 1443288 - 1443686 | 15015.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
