Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | DUE52_05775 | Not Available | Positive | 1427321 - 1428217 | 33484.4 |
| hypothetical protein | DUE52_05780 | Not Available | Negative | 1428318 - 1428854 | 20050.4 |
| class i sam-dependent methyltransferase | DUE52_05785 | Not Available | Negative | 1428983 - 1429576 | 22455.0 |
| hypothetical protein | DUE52_05790 | Not Available | Negative | 1429631 - 1429849 | 8048.76 |
| phosphohistidine phosphatase | DUE52_05795 | Not Available | Negative | 1429846 - 1430349 | 18344.0 |
| peptide chain release factor 3 | DUE52_05800 | Not Available | Positive | 1430668 - 1432263 | 60469.4 |
| peptidase t | DUE52_05805 | Not Available | Positive | 1432303 - 1433547 | 45554.7 |
| hypothetical protein | DUE52_05810 | Not Available | Positive | 1433977 - 1434246 | 10888.7 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_05815 | Not Available | Negative | 1434286 - 1435080 | 28627.4 |
| d-alanine--d-alanine ligase | DUE52_05820 | Not Available | Negative | 1435095 - 1436780 | 62637.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
