Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lmo0937 family membrane protein | DUE52_05725 | Not Available | Positive | 1418665 - 1418832 | 5839.73 |
| ytxh domain-containing protein | DUE52_05730 | Not Available | Positive | 1419324 - 1419611 | 10425.3 |
| ytxh domain-containing protein | DUE52_05735 | Not Available | Positive | 1419661 - 1419990 | 12270.2 |
| dna-binding response regulator | DUE52_05740 | Not Available | Positive | 1420739 - 1421416 | 25572.2 |
| sensor histidine kinase | DUE52_05745 | Not Available | Positive | 1421445 - 1422860 | 53984.6 |
| nadh-quinone oxidoreductase subunit e | DUE52_05750 | Not Available | Positive | 1422958 - 1424643 | 61160.9 |
| hypothetical protein | DUE52_05755 | Not Available | Negative | 1424718 - 1425182 | 17286.6 |
| marc family protein | DUE52_05760 | Not Available | Negative | 1425201 - 1425764 | 19920.4 |
| alanine--glyoxylate aminotransferase family protein | DUE52_05765 | Not Available | Negative | 1425758 - 1426765 | 37401.0 |
| type ii 3-dehydroquinate dehydratase | DUE52_05770 | Not Available | Negative | 1426791 - 1427219 | 15745.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
