Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DUE52_05625 | Not Available | Negative | 1396616 - 1397899 | 45725.2 |
| tetr/acrr family transcriptional regulator | DUE52_05630 | Not Available | Negative | 1397937 - 1398530 | 23236.3 |
| s9 family peptidase | DUE52_05635 | Not Available | Positive | 1399007 - 1402003 | 112968.0 |
| duf1573 domain-containing protein | DUE52_05640 | Not Available | Negative | 1402095 - 1402475 | 13324.2 |
| sensor histidine kinase | DUE52_05645 | Not Available | Positive | 1402660 - 1403943 | 48452.4 |
| dna-binding response regulator | DUE52_05650 | Not Available | Positive | 1403940 - 1404629 | 26384.1 |
| wd40 repeat domain-containing protein | DUE52_05655 | Not Available | Positive | 1404725 - 1405996 | 44312.0 |
| hypothetical protein | DUE52_05660 | Not Available | Negative | 1406083 - 1406280 | 7445.95 |
| ompa family protein | DUE52_05665 | Not Available | Positive | 1407177 - 1407872 | 24569.4 |
| pa2169 family four-helix-bundle protein | DUE52_05670 | Not Available | Positive | 1407934 - 1408389 | 17022.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
