Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | DUE52_05525 | Not Available | Negative | 1366942 - 1368594 | 60558.8 |
| fatty acid desaturase | DUE52_05530 | Not Available | Positive | 1368694 - 1369425 | 28448.4 |
| polyprenyl synthetase family protein | DUE52_05535 | Not Available | Negative | 1369491 - 1370465 | 36820.9 |
| patatin | DUE52_05540 | Not Available | Positive | 1370718 - 1371635 | 33801.1 |
| glycerophosphodiester phosphodiesterase | DUE52_05545 | Not Available | Negative | 1371638 - 1372507 | 32250.0 |
| hypothetical protein | DUE52_05550 | Not Available | Negative | 1372571 - 1375957 | 122723.0 |
| selenide, water dikinase seld | DUE52_05555 | Not Available | Positive | 1376343 - 1377389 | 37677.1 |
| alpha/beta fold hydrolase | DUE52_05560 | Not Available | Positive | 1377493 - 1378263 | 29454.4 |
| sam-dependent methyltransferase | DUE52_05565 | Not Available | Positive | 1378330 - 1379031 | 26040.7 |
| mbl fold metallo-hydrolase | DUE52_05570 | Not Available | Positive | 1379052 - 1379693 | 23835.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
