Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DUE52_05475 | Not Available | Negative | 1354713 - 1357574 | 104060.0 |
| sdr family nad-dependent epimerase/dehydratase | DUE52_05480 | Not Available | Negative | 1357795 - 1358775 | 37140.5 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DUE52_05485 | Not Available | Negative | 1358810 - 1360141 | 48907.9 |
| acyl-coa dehydrogenase | DUE52_05490 | Not Available | Positive | 1360458 - 1361612 | 41458.5 |
| class a beta-lactamase-related serine hydrolase | DUE52_05495 | Not Available | Negative | 1361640 - 1362782 | 42619.9 |
| hypothetical protein | DUE52_05500 | Not Available | Negative | 1362873 - 1363454 | 21726.5 |
| lyttr family transcriptional regulator | DUE52_05505 | Not Available | Negative | 1363601 - 1364521 | 34844.7 |
| paraslipin | DUE52_05510 | Not Available | Positive | 1364754 - 1365671 | 33765.1 |
| nfed family protein | DUE52_05515 | Not Available | Positive | 1365676 - 1366143 | 17182.9 |
| hypothetical protein | DUE52_05520 | Not Available | Negative | 1366193 - 1366804 | 24109.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
