Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_05425 | Not Available | Negative | 1331353 - 1332489 | 42136.8 |
| cell surface protein spra | DUE52_05430 | Not Available | Negative | 1332588 - 1340003 | 279712.0 |
| holliday junction branch migration protein ruva | DUE52_05435 | Not Available | Negative | 1340243 - 1340836 | 21456.4 |
| lysm peptidoglycan-binding domain-containing protein | DUE52_05440 | Not Available | Negative | 1340997 - 1342574 | 59994.8 |
| hypothetical protein | DUE52_05445 | Not Available | Negative | 1342851 - 1343099 | 9494.37 |
| hypothetical protein | DUE52_05450 | Not Available | Positive | 1343120 - 1344397 | 48938.8 |
| glycosyltransferase | DUE52_05455 | Not Available | Positive | 1344394 - 1348230 | 146301.0 |
| hypothetical protein | DUE52_05460 | Not Available | Negative | 1348197 - 1350107 | 72724.2 |
| alpha-l-rhamnosidase | DUE52_05465 | Not Available | Positive | 1350163 - 1352967 | 104211.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_05470 | Not Available | Negative | 1353121 - 1354620 | 56086.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
