Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase | DUE52_05375 | Not Available | Negative | 1323478 - 1324068 | 21586.0 |
| hypothetical protein | DUE52_05380 | Not Available | Positive | 1324300 - 1324503 | 7835.48 |
| l-lysine dehydrogenase | DUE52_05385 | Not Available | Positive | 1324500 - 1325552 | 38469.8 |
| yicc family protein | DUE52_05390 | Not Available | Negative | 1325620 - 1326510 | 33790.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DUE52_05395 | Not Available | Negative | 1326517 - 1327677 | 42869.4 |
| phosphoglycerate dehydrogenase | DUE52_05400 | Not Available | Positive | 1327835 - 1328791 | 35315.7 |
| serine hydrolase | DUE52_05405 | Not Available | Positive | 1328808 - 1329653 | 31349.6 |
| smug2 dna glycosylase family protein | DUE52_05410 | Not Available | Positive | 1329655 - 1330347 | 26311.3 |
| duf4339 domain-containing protein | DUE52_05415 | Not Available | Positive | 1330449 - 1330985 | 19837.6 |
| duf2752 domain-containing protein | DUE52_05420 | Not Available | Positive | 1331026 - 1331352 | 12284.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
