Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_05225 | Not Available | Positive | 1290819 - 1291292 | 17873.0 |
| n-acetyltransferase | DUE52_05230 | Not Available | Positive | 1291334 - 1291861 | 20131.2 |
| hypothetical protein | DUE52_05235 | Not Available | Positive | 1291858 - 1292694 | 33573.8 |
| virion core protein (lumpy skin disease virus) | DUE52_05240 | Not Available | Positive | 1292869 - 1293849 | 36349.4 |
| hypothetical protein | DUE52_05245 | Not Available | Positive | 1293939 - 1295036 | 41688.4 |
| abc transporter atp-binding protein | DUE52_05250 | Not Available | Positive | 1295197 - 1296201 | 37252.5 |
| duf2807 domain-containing protein | DUE52_05255 | Not Available | Negative | 1296198 - 1296893 | 24871.4 |
| n-acetylgalactosamine 6-sulfate sulfatase | DUE52_05260 | Not Available | Negative | 1296962 - 1298347 | 51705.0 |
| 7-carboxy-7-deazaguanine synthase quee | DUE52_05265 | Not Available | Positive | 1298462 - 1299043 | 21824.9 |
| flagellar motor protein motb | DUE52_05270 | Not Available | Positive | 1298998 - 1300995 | 74372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
