Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | DUE52_05175 | Not Available | Negative | 1277905 - 1278342 | 15988.4 |
| hypothetical protein | DUE52_05180 | Not Available | Positive | 1278535 - 1278924 | 14626.6 |
| atp-dependent endonuclease | DUE52_05185 | Not Available | Positive | 1278968 - 1280410 | 55281.2 |
| hypothetical protein | DUE52_05190 | Not Available | Positive | 1280397 - 1280690 | 11229.9 |
| hypothetical protein | DUE52_05195 | Not Available | Positive | 1280694 - 1282043 | 50011.4 |
| response regulator | DUE52_05200 | Not Available | Positive | 1282127 - 1282555 | 16126.5 |
| pas domain-containing sensor histidine kinase | DUE52_05205 | Not Available | Positive | 1282953 - 1284581 | 61705.2 |
| hypothetical protein | DUE52_05210 | Not Available | Positive | 1285143 - 1287524 | 86752.5 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | DUE52_05215 | Not Available | Positive | 1287824 - 1289452 | 60125.6 |
| cupin-like domain-containing protein | DUE52_05220 | Not Available | Positive | 1289684 - 1290574 | 34905.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
