Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_05125 | Not Available | Negative | 1266281 - 1267768 | 54053.8 |
| dna-protecting protein dpra | DUE52_05130 | Not Available | Positive | 1267949 - 1268977 | 37953.9 |
| duf4394 domain-containing protein | DUE52_05135 | Not Available | Negative | 1269484 - 1271067 | 55266.0 |
| hypothetical protein | DUE52_05140 | Not Available | Negative | 1271266 - 1272729 | 55421.8 |
| orotate phosphoribosyltransferase | DUE52_05145 | Not Available | Negative | 1272741 - 1273367 | 22782.4 |
| hlyc/corc family transporter | DUE52_05150 | Not Available | Negative | 1273481 - 1274764 | 48096.0 |
| nudix domain-containing protein | DUE52_05155 | Not Available | Positive | 1274910 - 1275611 | 26423.1 |
| pantetheine-phosphate adenylyltransferase | DUE52_05160 | Not Available | Negative | 1275734 - 1276189 | 17277.8 |
| duf3822 family protein | DUE52_05165 | Not Available | Negative | 1276256 - 1277137 | 33637.9 |
| nudix hydrolase | DUE52_05170 | Not Available | Negative | 1277255 - 1277743 | 18915.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
