Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_05075 | Not Available | Negative | 1254610 - 1254801 | 6883.34 |
| duf4178 domain-containing protein | DUE52_05080 | Not Available | Negative | 1254958 - 1256232 | 48569.6 |
| s-adenosylmethionine decarboxylase | DUE52_05085 | Not Available | Negative | 1256247 - 1256603 | 13400.0 |
| hypothetical protein | DUE52_05090 | Not Available | Negative | 1256625 - 1258319 | 63421.8 |
| hypothetical protein | DUE52_05095 | Not Available | Positive | 1258501 - 1258776 | 10557.4 |
| alanine--trna ligase | DUE52_05100 | Not Available | Negative | 1258890 - 1261544 | 98766.6 |
| merr family transcriptional regulator | DUE52_05105 | Not Available | Positive | 1261650 - 1261979 | 12976.8 |
| hypothetical protein | DUE52_05110 | Not Available | Negative | 1262085 - 1263593 | 56111.7 |
| hypothetical protein | DUE52_05115 | Not Available | Negative | 1263590 - 1263802 | 7741.76 |
| cytochrome c peroxidase | DUE52_05120 | Not Available | Negative | 1264393 - 1266342 | 73332.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
