Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxy-galactonokinase | DUE52_05025 | Not Available | Positive | 1245001 - 1245999 | 36784.1 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DUE52_05030 | Not Available | Positive | 1246011 - 1246655 | 23268.4 |
| mfs transporter | DUE52_05035 | Not Available | Positive | 1246705 - 1248009 | 48038.3 |
| arylsulfatase | DUE52_05040 | Not Available | Positive | 1248178 - 1249566 | 50807.6 |
| hypothetical protein | DUE52_05045 | Not Available | Negative | 1249579 - 1249788 | 8079.3 |
| hypothetical protein | DUE52_05050 | Not Available | Negative | 1249880 - 1250191 | 11379.5 |
| hypothetical protein | DUE52_05055 | Not Available | Negative | 1250713 - 1251180 | 17849.4 |
| fad-dependent oxidoreductase | DUE52_05060 | Not Available | Negative | 1251239 - 1252891 | 60795.1 |
| polyamine aminopropyltransferase | DUE52_05065 | Not Available | Negative | 1252866 - 1254389 | 57334.0 |
| duf350 domain-containing protein | DUE52_05070 | Not Available | Negative | 1254382 - 1254597 | 7787.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
