Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | DUE52_04975 | Not Available | Positive | 1230323 - 1230925 | 22477.2 |
| gluconate transporter | DUE52_04980 | Not Available | Positive | 1230944 - 1232260 | 46098.1 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DUE52_04985 | Not Available | Negative | 1232274 - 1234523 | 81129.2 |
| xanthine dehydrogenase family protein subunit m | DUE52_04990 | Not Available | Negative | 1234532 - 1235530 | 36153.9 |
| (2fe-2s)-binding protein | DUE52_04995 | Not Available | Negative | 1235527 - 1236177 | 23437.9 |
| laci family transcriptional regulator | DUE52_05000 | Not Available | Positive | 1236353 - 1237390 | 38674.8 |
| mandelate racemase/muconate lactonizing enzyme family protein | DUE52_05005 | Not Available | Positive | 1237463 - 1238704 | 45644.8 |
| susc/raga family tonb-linked outer membrane protein | DUE52_05010 | Not Available | Positive | 1238825 - 1241959 | 114354.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_05015 | Not Available | Positive | 1241987 - 1243534 | 57426.1 |
| galactonate dehydratase | DUE52_05020 | Not Available | Positive | 1243663 - 1244898 | 45031.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
