Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha,alpha-trehalase tref | DUE52_00435 | Not Available | Negative | 121660 - 123219 | 58947.4 |
| maltose alpha-d-glucosyltransferase | DUE52_00440 | Not Available | Positive | 123495 - 126806 | 127536.0 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | DUE52_00445 | Not Available | Positive | 127005 - 129206 | 84147.1 |
| gntp family permease | DUE52_00450 | Not Available | Positive | 129293 - 130687 | 49217.4 |
| aquaporin z | DUE52_00455 | Not Available | Negative | 130970 - 131671 | 23707.6 |
| lysr family transcriptional regulator | DUE52_00460 | Not Available | Negative | 131763 - 132689 | 35002.9 |
| nadp-dependent isocitrate dehydrogenase | DUE52_00465 | Not Available | Positive | 132780 - 134216 | 52884.6 |
| hypothetical protein | DUE52_00470 | Not Available | Positive | 134241 - 134489 | 9351.32 |
| hypothetical protein | DUE52_00475 | Not Available | Positive | 134486 - 134695 | 7685.79 |
| duf1080 domain-containing protein | DUE52_00480 | Not Available | Negative | 134759 - 135442 | 24956.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
